| A3401 | Stockholm-Arlanda Airport (ARN) | Kalamata Airport (KLX) | 11:25 | 16:05 |
| A3651 | Leonardo da Vinci–Fiumicino Airport (FCO) | Eleftherios Venizelos International Airport (ATH) | 11:00 | 13:40 |
| A3561 | Adolfo Suárez Madrid–Barajas Airport (MAD) | Mikonos Airport (JMK) | 01:00 | 05:30 |
| A3479 | Adolfo Suárez Madrid–Barajas Airport (MAD) | Santorini Airport (JTR) | 00:40 | 05:10 |
| A3478 | Santorini Airport (JTR) | Adolfo Suárez Madrid–Barajas Airport (MAD) | 21:20 | 23:50 |
| A3492 | Santorini Airport (JTR) | Leonardo da Vinci–Fiumicino Airport (FCO) | 13:15 | 14:20 |
| A3493 | Leonardo da Vinci–Fiumicino Airport (FCO) | Santorini Airport (JTR) | 15:10 | 18:10 |
| A3494 | Santorini Airport (JTR) | Malpensa International Airport (MXP) | 18:55 | 20:35 |
| A3495 | Malpensa International Airport (MXP) | Santorini Airport (JTR) | 21:25 | 00:55 |
| A3488 | Santorini Airport (JTR) | Charles de Gaulle International Airport (CDG) | 07:00 | 09:30 |
| A3489 | Charles de Gaulle International Airport (CDG) | Santorini Airport (JTR) | 10:20 | 14:35 |
| A3498 | Santorini Airport (JTR) | London Gatwick Airport (LGW) | 15:35 | 17:35 |
| A3499 | London Gatwick Airport (LGW) | Santorini Airport (JTR) | 18:35 | 00:10 |
| A3529 | Pulkovo Airport (LED) | Thessaloniki Macedonia International Airport (SKG) | 03:50 | 07:00 |
| A3452 | Heraklion International Nikos Kazantzakis Airport (HER) | Charles de Gaulle International Airport (CDG) | 07:15 | 09:50 |
| A3615 | Charles de Gaulle International Airport (CDG) | Eleftherios Venizelos International Airport (ATH) | 20:15 | 00:25 |
| A3438 | Heraklion International Nikos Kazantzakis Airport (HER) | Düsseldorf International Airport (DUS) | 07:10 | 09:35 |
| A3503 | Munich International Airport (MUC) | Thessaloniki Macedonia International Airport (SKG) | 19:40 | 22:50 |
| A3925 | Ben Gurion International Airport (TLV) | Eleftherios Venizelos International Airport (ATH) | 19:50 | 22:00 |
| OA358 | Eleftherios Venizelos International Airport (ATH) | Santorini Airport (JTR) | 17:35 | 18:20 |
| A3864 | Eleftherios Venizelos International Airport (ATH) | Václav Havel Airport Prague (PRG) | 08:55 | 10:35 |
| A3650 | Eleftherios Venizelos International Airport (ATH) | Leonardo da Vinci–Fiumicino Airport (FCO) | 08:40 | 09:45 |
| A3661 | Malpensa International Airport (MXP) | Eleftherios Venizelos International Airport (ATH) | 11:00 | 14:30 |
| A3510 | Thessaloniki Macedonia International Airport (SKG) | Stuttgart Airport (STR) | 17:30 | 19:00 |
| A3881 | Домодедово (DME) | Eleftherios Venizelos International Airport (ATH) | 13:45 | 16:15 |
| A3880 | Eleftherios Venizelos International Airport (ATH) | Домодедово (DME) | 08:35 | 12:55 |
| A3540 | Thessaloniki Macedonia International Airport (SKG) | Düsseldorf International Airport (DUS) | 10:15 | 12:05 |
| A3655 | Leonardo da Vinci–Fiumicino Airport (FCO) | Eleftherios Venizelos International Airport (ATH) | 17:35 | 20:30 |
| A3618 | Eleftherios Venizelos International Airport (ATH) | Charles de Gaulle International Airport (CDG) | 20:05 | 22:40 |
| A3580 | Thessaloniki Macedonia International Airport (SKG) | Домодедово (DME) | 08:40 | 12:20 |
